Trajectories
The trajectories/ folder is the default location that experiment results (invocations of run.py) will be written to.
Example trajectory
{
"environment": "swe_main",
"trajectory": [
{
"action": "ls -F\n",
"observation": "AUTHORS.rst\nCHANGELOG.rst\nCODE_OF_CONDUCT.md\nCONTRIBUTING.rst\nLICENSE\nMANIFEST.in\nNOTICE\nREADME.rst\nRELEASING.md\nazure-pipelines.yml\ndocs/\nexamples/\nperformance/\npyproject.toml\nsetup.cfg\nsetup.py\nsrc/\ntests/\ntox.ini\n",
"response": "Let's list out some of the files in the repository to get an idea of the structure and contents. We can use the `ls -F` command to list the files in the current directory.\n```\nls -F\n```",
"state": "{\"open_file\": \"n/a\", \"working_dir\": \"/marshmallow-code__marshmallow\"}\n",
"thought": "Let's list out some of the files in the repository to get an idea of the structure and contents. We can use the `ls -F` command to list the files in the current directory.\n"
},
{
"action": "open setup.py\n",
"observation": "[File: /marshmallow-code__marshmallow/setup.py (94 lines total)]\n1:import re\n2:from setuptools import setup, find_packages\n3:\n4:EXTRAS_REQUIRE = {\n5: \"tests\": [\"pytest\", \"pytz\", \"simplejson\"],\n6: \"lint\": [\n7: \"mypy==0.910\",\n8: \"flake8==4.0.1\",\n9: \"flake8-bugbear==21.9.2\",\n10: \"pre-commit~=2.4\",\n11: ],\n12: \"docs\": [\n13: \"sphinx==4.2.0\",\n14: \"sphinx-issues==1.2.0\",\n15: \"alabaster==0.7.12\",\n16: \"sphinx-version-warning==1.1.2\",\n17: \"autodocsumm==0.2.7\",\n18: ],\n19:}\n20:EXTRAS_REQUIRE[\"dev\"] = EXTRAS_REQUIRE[\"tests\"] + EXTRAS_REQUIRE[\"lint\"] + [\"tox\"]\n21:\n22:\n23:def find_version(fname):\n24: \"\"\"Attempts to find the version number in the file names fname.\n25: Raises RuntimeError if not found.\n26: \"\"\"\n27: version = \"\"\n28: with open(fname) as fp:\n29: reg = re.compile(r'__version__ = [\\'\"]([^\\'\"]*)[\\'\"]')\n30: for line in fp:\n31: m = reg.match(line)\n32: if m:\n33: version = m.group(1)\n34: break\n35: if not version:\n36: raise RuntimeError(\"Cannot find version information\")\n37: return version\n38:\n39:\n40:def read(fname):\n41: with open(fname) as fp:\n42: content = fp.read()\n43: return content\n44:\n45:\n46:setup(\n47: name=\"marshmallow\",\n48: version=find_version(\"src/marshmallow/__init__.py\"),\n49: description=(\n50: \"A lightweight library for converting complex \"\n51: \"datatypes to and from native Python datatypes.\"\n52: ),\n53: long_description=read(\"README.rst\"),\n54: author=\"Steven Loria\",\n55: author_email=\"sloria1@gmail.com\",\n56: url=\"https://github.com/marshmallow-code/marshmallow\",\n57: packages=find_packages(\"src\", exclude=(\"test*\", \"examples\")),\n58: package_dir={\"\": \"src\"},\n59: package_data={\"marshmallow\": [\"py.typed\"]},\n60: include_package_data=True,\n61: extras_require=EXTRAS_REQUIRE,\n62: license=\"MIT\",\n63: zip_safe=False,\n64: keywords=[\n65: \"serialization\",\n66: \"rest\",\n67: \"json\",\n68: \"api\",\n69: \"marshal\",\n70: \"marshalling\",\n71: \"deserialization\",\n72: \"validation\",\n73: \"schema\",\n74: ],\n75: python_requires=\">=3.6\",\n76: classifiers=[\n77: \"Development Status :: 5 - Production/Stable\",\n78: \"Intended Audience :: Developers\",\n79: \"License :: OSI Approved :: MIT License\",\n80: \"Programming Language :: Python :: 3\",\n81: \"Programming Language :: Python :: 3.6\",\n82: \"Programming Language :: Python :: 3.7\",\n83: \"Programming Language :: Python :: 3.8\",\n84: \"Programming Language :: Python :: 3.9\",\n85: \"Programming Language :: Python :: 3.10\",\n86: ],\n87: test_suite=\"tests\",\n88: project_urls={\n89: \"Changelog\": \"https://marshmallow.readthedocs.io/en/latest/changelog.html\",\n90: \"Issues\": \"https://github.com/marshmallow-code/marshmallow/issues\",\n91: \"Funding\": \"https://opencollective.com/marshmallow\",\n92: \"Tidelift\": \"https://tidelift.com/subscription/pkg/pypi-marshmallow?utm_source=pypi-marshmallow&utm_medium=pypi\", # noqa\n93: },\n94:)\n",
"response": "We see that there's a setup.py file. This could be useful for installing the package locally. Since we'll probably need to reproduce the issue to solve it, it would be a good idea to install the package locally. Let's checkout the setup.py file to see what commands we can use to install the package.\n```\nopen setup.py\n```",
"state": "{\"open_file\": \"n/a\", \"working_dir\": \"/marshmallow-code__marshmallow\"}\n",
"thought": "We see that there's a setup.py file. This could be useful for installing the package locally. Since we'll probably need to reproduce the issue to solve it, it would be a good idea to install the package locally. Let's checkout the setup.py file to see what commands we can use to install the package.\n"
},
{
"action": "pip install -e .[dev]\n",
"observation": "Obtaining file:///marshmallow-code__marshmallow\n Installing build dependencies: started\n Installing build dependencies: finished with status 'done'\n Checking if build backend supports build_editable: started\n Checking if build backend supports build_editable: finished with status 'done'\n Getting requirements to build editable: started\n Getting requirements to build editable: finished with status 'done'\n Preparing editable metadata (pyproject.toml): started\n Preparing editable metadata (pyproject.toml): finished with status 'done'\nRequirement already satisfied: pytest in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (8.1.1)\nRequirement already satisfied: pytz in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (2024.1)\nRequirement already satisfied: simplejson in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (3.19.2)\nRequirement already satisfied: mypy==0.910 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (0.910)\nRequirement already satisfied: flake8==4.0.1 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (4.0.1)\nRequirement already satisfied: flake8-bugbear==21.9.2 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (21.9.2)\nRequirement already satisfied: pre-commit~=2.4 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (2.21.0)\nRequirement already satisfied: tox in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (4.14.2)\nRequirement already satisfied: mccabe<0.7.0,>=0.6.0 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from flake8==4.0.1) (0.6.1)\nRequirement already satisfied: pycodestyle<2.9.0,>=2.8.0 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from flake8==4.0.1) (2.8.0)\nRequirement already satisfied: pyflakes<2.5.0,>=2.4.0 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from flake8==4.0.1) (2.4.0)\nRequirement already satisfied: attrs>=19.2.0 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from flake8-bugbear==21.9.2) (23.2.0)\nRequirement already satisfied: typing-extensions>=3.7.4 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from mypy==0.910) (4.10.0)\nRequirement already satisfied: mypy-extensions<0.5.0,>=0.4.3 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from mypy==0.910) (0.4.4)\nRequirement already satisfied: toml in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from mypy==0.910) (0.10.2)\nRequirement already satisfied: cfgv>=2.0.0 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from pre-commit~=2.4) (3.4.0)\nRequirement already satisfied: identify>=1.0.0 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from pre-commit~=2.4) (2.5.35)\nRequirement already satisfied: nodeenv>=0.11.1 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from pre-commit~=2.4) (1.8.0)\nRequirement already satisfied: pyyaml>=5.1 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from pre-commit~=2.4) (6.0.1)\nRequirement already satisfied: virtualenv>=20.10.0 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from pre-commit~=2.4) (20.25.1)\nRequirement already satisfied: iniconfig in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from pytest) (2.0.0)\nRequirement already satisfied: packaging in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from pytest) (24.0)\nRequirement already satisfied: pluggy<2.0,>=1.4 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from pytest) (1.4.0)\nRequirement already satisfied: exceptiongroup>=1.0.0rc8 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from pytest) (1.2.0)\nRequirement already satisfied: tomli>=1 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from pytest) (2.0.1)\nRequirement already satisfied: cachetools>=5.3.2 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from tox) (5.3.3)\nRequirement already satisfied: chardet>=5.2 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from tox) (5.2.0)\nRequirement already satisfied: colorama>=0.4.6 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from tox) (0.4.6)\nRequirement already satisfied: filelock>=3.13.1 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from tox) (3.13.3)\nRequirement already satisfied: platformdirs>=4.1 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from tox) (4.2.0)\nRequirement already satisfied: pyproject-api>=1.6.1 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from tox) (1.6.1)\nRequirement already satisfied: setuptools in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from nodeenv>=0.11.1->pre-commit~=2.4) (68.2.2)\nRequirement already satisfied: distlib<1,>=0.3.7 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from virtualenv>=20.10.0->pre-commit~=2.4) (0.3.8)\nChecking if build backend supports build_editable: started\nChecking if build backend supports build_editable: finished with status 'done'\nBuilding wheels for collected packages: marshmallow\n Building editable for marshmallow (pyproject.toml): started\n Building editable for marshmallow (pyproject.toml): finished with status 'done'\n Created wheel for marshmallow: filename=marshmallow-3.13.0-0.editable-py3-none-any.whl size=4534 sha256=fcca61a41cd2783d4a5b8471ebc48cf886d36f6c66a29cc9b02761fc174a024d\n Stored in directory: /tmp/pip-ephem-wheel-cache-h335xxo8/wheels/4d/da/d4/e230bf0a3f16cad5a83d235ac24a34b55178ddda181cb64dae\nSuccessfully built marshmallow\nInstalling collected packages: marshmallow\n Attempting uninstall: marshmallow\n Found existing installation: marshmallow 3.13.0\n Uninstalling marshmallow-3.13.0:\n Successfully uninstalled marshmallow-3.13.0\nSuccessfully installed marshmallow-3.13.0\nWARNING: Running pip as the 'root' user can result in broken permissions and conflicting behaviour with the system package manager. It is recommended to use a virtual environment instead: https://pip.pypa.io/warnings/venv\n",
"response": "The setup.py file contains a lot of useful information to install the package locally. In particular, I see there's a [dev] extras that installs all the dependencies needed for development. We can use this to install the package with all the necessary dependencies. Let's install the package locally with the [dev] extras.\n```\npip install -e .[dev]\n```",
"state": "{\"open_file\": \"/marshmallow-code__marshmallow/setup.py\", \"working_dir\": \"/marshmallow-code__marshmallow\"}\n",
"thought": "The setup.py file contains a lot of useful information to install the package locally. In particular, I see there's a [dev] extras that installs all the dependencies needed for development. We can use this to install the package with all the necessary dependencies. Let's install the package locally with the [dev] extras.\n"
},
{
"action": "create reproduce.py\n",
"observation": "[File: /marshmallow-code__marshmallow/reproduce.py (1 lines total)]\n1:\n",
"response": "Looks like it installed successfully. Now that we have the package installed, we can start working on the issue.\nLet's first start by reproducing the results of the issue. The issue includes some example code for reproduction, which we can use. We'll create a new file called `reproduce.py` and paste the example code into it.\n```\ncreate reproduce.py\n```",
"state": "{\"open_file\": \"/marshmallow-code__marshmallow/setup.py\", \"working_dir\": \"/marshmallow-code__marshmallow\"}\n",
"thought": "Looks like it installed successfully. Now that we have the package installed, we can start working on the issue.\nLet's first start by reproducing the results of the issue. The issue includes some example code for reproduction, which we can use. We'll create a new file called `reproduce.py` and paste the example code into it.\n"
},
{
"action": "edit 1:1\nfrom marshmallow.fields import TimeDelta\nfrom datetime import timedelta\n\ntd_field = TimeDelta(precision=\"milliseconds\")\n\nobj = dict()\nobj[\"td_field\"] = timedelta(milliseconds=345)\n\nprint(td_field.serialize(\"td_field\", obj))\nend_of_edit\n",
"observation": "[File: /marshmallow-code__marshmallow/reproduce.py (9 lines total)]\n1:from marshmallow.fields import TimeDelta\n2:from datetime import timedelta\n3:\n4:td_field = TimeDelta(precision=\"milliseconds\")\n5:\n6:obj = dict()\n7:obj[\"td_field\"] = timedelta(milliseconds=345)\n8:\n9:print(td_field.serialize(\"td_field\", obj))\nFile updated. Please review the changes and make sure they are correct (correct indentation, no duplicate lines, etc). Edit the file again if necessary.\n",
"response": "Now let's paste in the example code from the issue.\n```\nedit 1:1\nfrom marshmallow.fields import TimeDelta\nfrom datetime import timedelta\n\ntd_field = TimeDelta(precision=\"milliseconds\")\n\nobj = dict()\nobj[\"td_field\"] = timedelta(milliseconds=345)\n\nprint(td_field.serialize(\"td_field\", obj))\nend_of_edit\n```",
"state": "{\"open_file\": \"/marshmallow-code__marshmallow/reproduce.py\", \"working_dir\": \"/marshmallow-code__marshmallow\"}\n",
"thought": "Now let's paste in the example code from the issue.\n"
},
{
"action": "python reproduce.py\n",
"observation": "344\n",
"response": "Now let's run the code to see if we see the same output as the issue.\n```\npython reproduce.py\n```",
"state": "{\"open_file\": \"/marshmallow-code__marshmallow/reproduce.py\", \"working_dir\": \"/marshmallow-code__marshmallow\"}\n",
"thought": "Now let's run the code to see if we see the same output as the issue.\n"
},
{
"action": "ls -F\n",
"observation": "AUTHORS.rst\nCHANGELOG.rst\nCODE_OF_CONDUCT.md\nCONTRIBUTING.rst\nLICENSE\nMANIFEST.in\nNOTICE\nREADME.rst\nRELEASING.md\nazure-pipelines.yml\ndocs/\nexamples/\nperformance/\npyproject.toml\nreproduce.py\nsetup.cfg\nsetup.py\nsrc/\ntests/\ntox.ini\n",
"response": "We are indeed seeing the same output as the issue. The issue suggests that we should look at line 1474 of the `fields.py` file to see if there is a rounding issue. Let's open the `fields.py` file and navigate to line 1474 to see the relevant code. First we should find the `fields.py` file in the repository. It is likely to be in the `src/marshmallow` directory, but we should check to be sure.\n```\nls -F\n```",
"state": "{\"open_file\": \"/marshmallow-code__marshmallow/reproduce.py\", \"working_dir\": \"/marshmallow-code__marshmallow\"}\n",
"thought": "We are indeed seeing the same output as the issue. The issue suggests that we should look at line 1474 of the `fields.py` file to see if there is a rounding issue. Let's open the `fields.py` file and navigate to line 1474 to see the relevant code. First we should find the `fields.py` file in the repository. It is likely to be in the `src/marshmallow` directory, but we should check to be sure.\n"
},
{
"action": "find_file \"fields.py\" src\n",
"observation": "Found 1 matches for \"fields.py\" in /marshmallow-code__marshmallow/src:\n/marshmallow-code__marshmallow/src/marshmallow/fields.py\n",
"response": "It looks like the `src` directory is present, which suggests that the `fields.py` file is likely to be in the `src` directory. Let's use find_file to see where it is.\n```\nfind_file \"fields.py\" src\n```",
"state": "{\"open_file\": \"/marshmallow-code__marshmallow/reproduce.py\", \"working_dir\": \"/marshmallow-code__marshmallow\"}\n",
"thought": "It looks like the `src` directory is present, which suggests that the `fields.py` file is likely to be in the `src` directory. Let's use find_file to see where it is.\n"
},
{
"action": "open src/marshmallow/fields.py 1474\n",
"observation": "[File: /marshmallow-code__marshmallow/src/marshmallow/fields.py (1997 lines total)]\n(1458 more lines above)\n1459: self.WEEKS,\n1460: )\n1461:\n1462: if precision not in units:\n1463: msg = 'The precision must be {} or \"{}\".'.format(\n1464: \", \".join([f'\"{each}\"' for each in units[:-1]]), units[-1]\n1465: )\n1466: raise ValueError(msg)\n1467:\n1468: self.precision = precision\n1469: super().__init__(**kwargs)\n1470:\n1471: def _serialize(self, value, attr, obj, **kwargs):\n1472: if value is None:\n1473: return None\n1474: base_unit = dt.timedelta(**{self.precision: 1})\n1475: return int(value.total_seconds() / base_unit.total_seconds())\n1476:\n1477: def _deserialize(self, value, attr, data, **kwargs):\n1478: try:\n1479: value = int(value)\n1480: except (TypeError, ValueError) as error:\n1481: raise self.make_error(\"invalid\") from error\n1482:\n1483: kwargs = {self.precision: value}\n1484:\n1485: try:\n1486: return dt.timedelta(**kwargs)\n1487: except OverflowError as error:\n1488: raise self.make_error(\"invalid\") from error\n1489:\n1490:\n1491:class Mapping(Field):\n1492: \"\"\"An abstract class for objects with key-value pairs.\n1493:\n1494: :param keys: A field class or instance for dict keys.\n1495: :param values: A field class or instance for dict values.\n1496: :param kwargs: The same keyword arguments that :class:`Field` receives.\n1497:\n1498: .. note::\n1499: When the structure of nested data is not known, you may omit the\n1500: `keys` and `values` arguments to prevent content validation.\n1501:\n1502: .. versionadded:: 3.0.0rc4\n1503: \"\"\"\n1504:\n1505: mapping_type = dict\n1506:\n1507: #: Default error messages.\n1508: default_error_messages = {\"invalid\": \"Not a valid mapping type.\"}\n1509:\n1510: def __init__(\n1511: self,\n1512: keys: typing.Optional[typing.Union[Field, type]] = None,\n1513: values: typing.Optional[typing.Union[Field, type]] = None,\n1514: **kwargs,\n1515: ):\n1516: super().__init__(**kwargs)\n1517: if keys is None:\n1518: self.key_field = None\n1519: else:\n1520: try:\n1521: self.key_field = resolve_field_instance(keys)\n1522: except FieldInstanceResolutionError as error:\n1523: raise ValueError(\n1524: '\"keys\" must be a subclass or instance of '\n1525: \"marshmallow.base.FieldABC.\"\n1526: ) from error\n1527:\n1528: if values is None:\n1529: self.value_field = None\n1530: else:\n1531: try:\n1532: self.value_field = resolve_field_instance(values)\n1533: except FieldInstanceResolutionError as error:\n1534: raise ValueError(\n1535: '\"values\" must be a subclass or instance of '\n1536: \"marshmallow.base.FieldABC.\"\n1537: ) from error\n1538: if isinstance(self.value_field, Nested):\n1539: self.only = self.value_field.only\n1540: self.exclude = self.value_field.exclude\n1541:\n1542: def _bind_to_schema(self, field_name, schema):\n1543: super()._bind_to_schema(field_name, schema)\n1544: if self.value_field:\n1545: self.value_field = copy.deepcopy(self.value_field)\n1546: self.value_field._bind_to_schema(field_name, self)\n1547: if isinstance(self.value_field, Nested):\n1548: self.value_field.only = self.only\n1549: self.value_field.exclude = self.exclude\n1550: if self.key_field:\n1551: self.key_field = copy.deepcopy(self.key_field)\n1552: self.key_field._bind_to_schema(field_name, self)\n1553:\n1554: def _serialize(self, value, attr, obj, **kwargs):\n1555: if value is None:\n1556: return None\n1557: if not self.value_field and not self.key_field:\n1558: return self.mapping_type(value)\n(439 more lines below)\n",
"response": "It looks like the `fields.py` file is present in the `./src/marshmallow/` directory. The issue also points to a specific URL with line number 1474. We should navigate to that line in fields.py to see the relevant code for the `TimeDelta` serialization.\n```\nopen src/marshmallow/fields.py 1474\n```",
"state": "{\"open_file\": \"/marshmallow-code__marshmallow/reproduce.py\", \"working_dir\": \"/marshmallow-code__marshmallow\"}\n",
"thought": "It looks like the `fields.py` file is present in the `./src/marshmallow/` directory. The issue also points to a specific URL with line number 1474. We should navigate to that line in fields.py to see the relevant code for the `TimeDelta` serialization.\n"
},
{
"action": "edit 1475:1475\nreturn int(round(value.total_seconds() / base_unit.total_seconds())) # round to nearest int\nend_of_edit\n",
"observation": "Your proposed edit has introduced new syntax error(s). Please understand the fixes and retry your edit commmand.\n\nERRORS:\n- E999 IndentationError: unexpected indent\n\nThis is how your edit would have looked if applied\n-------------------------------------------------\n[File: /marshmallow-code__marshmallow/src/marshmallow/fields.py (1997 lines total)]\n(1468 more lines above)\n1469: super().__init__(**kwargs)\n1470:\n1471: def _serialize(self, value, attr, obj, **kwargs):\n1472: if value is None:\n1473: return None\n1474: base_unit = dt.timedelta(**{self.precision: 1})\n1475:return int(round(value.total_seconds() / base_unit.total_seconds())) # round to nearest int\n1476:\n1477: def _deserialize(self, value, attr, data, **kwargs):\n1478: try:\n1479: value = int(value)\n(518 more lines below)\n-------------------------------------------------\n\nThis is the original code before your edit\n-------------------------------------------------\n[File: /marshmallow-code__marshmallow/src/marshmallow/fields.py (1997 lines total)]\n(1469 more lines above)\n1470:\n1471: def _serialize(self, value, attr, obj, **kwargs):\n1472: if value is None:\n1473: return None\n1474: base_unit = dt.timedelta(**{self.precision: 1})\n1475: return int(value.total_seconds() / base_unit.total_seconds())\n1476:\n1477: def _deserialize(self, value, attr, data, **kwargs):\n1478: try:\n1479: value = int(value)\n1480: except (TypeError, ValueError) as error:\n(517 more lines below)\n-------------------------------------------------\nYour changes have NOT been applied. Please fix your edit command and try again.\nYou either need to 1) Specify the correct start/end line arguments or 2) Correct your edit code.\nDO NOT re-run the same failed edit command. Running it again will lead to the same error.\n",
"response": "We are now looking at the relevant section of the `fields.py` file where the `TimeDelta` serialization occurs. The issue suggests that there is a rounding problem near line 1474. The current implementation uses integer division, which truncates the decimal part and can lead to incorrect rounding on line 1475.To fix this issue, we should ensure that the division results in a float, and then round the result to the nearest integer before converting it to an int. This should preserve the milliseconds precision as expected. Let's make the necessary edit to the code.\n```\nedit 1475:1475\nreturn int(round(value.total_seconds() / base_unit.total_seconds())) # round to nearest int\nend_of_edit\n```",
"state": "{\"open_file\": \"/marshmallow-code__marshmallow/src/marshmallow/fields.py\", \"working_dir\": \"/marshmallow-code__marshmallow\"}\n",
"thought": "We are now looking at the relevant section of the `fields.py` file where the `TimeDelta` serialization occurs. The issue suggests that there is a rounding problem near line 1474. The current implementation uses integer division, which truncates the decimal part and can lead to incorrect rounding on line 1475.To fix this issue, we should ensure that the division results in a float, and then round the result to the nearest integer before converting it to an int. This should preserve the milliseconds precision as expected. Let's make the necessary edit to the code.\n"
},
{
"action": "edit 1475:1475\n return int(round(value.total_seconds() / base_unit.total_seconds())) # round to nearest int\nend_of_edit\n",
"observation": "[File: /marshmallow-code__marshmallow/src/marshmallow/fields.py (1997 lines total)]\n(1424 more lines above)\n1425:\n1426: :param precision: Influences how the integer is interpreted during\n1427: (de)serialization. Must be 'days', 'seconds', 'microseconds',\n1428: 'milliseconds', 'minutes', 'hours' or 'weeks'.\n1429: :param kwargs: The same keyword arguments that :class:`Field` receives.\n1430:\n1431: .. versionchanged:: 2.0.0\n1432: Always serializes to an integer value to avoid rounding errors.\n1433: Add `precision` parameter.\n1434: \"\"\"\n1435:\n1436: DAYS = \"days\"\n1437: SECONDS = \"seconds\"\n1438: MICROSECONDS = \"microseconds\"\n1439: MILLISECONDS = \"milliseconds\"\n1440: MINUTES = \"minutes\"\n1441: HOURS = \"hours\"\n1442: WEEKS = \"weeks\"\n1443:\n1444: #: Default error messages.\n1445: default_error_messages = {\n1446: \"invalid\": \"Not a valid period of time.\",\n1447: \"format\": \"{input!r} cannot be formatted as a timedelta.\",\n1448: }\n1449:\n1450: def __init__(self, precision: str = SECONDS, **kwargs):\n1451: precision = precision.lower()\n1452: units = (\n1453: self.DAYS,\n1454: self.SECONDS,\n1455: self.MICROSECONDS,\n1456: self.MILLISECONDS,\n1457: self.MINUTES,\n1458: self.HOURS,\n1459: self.WEEKS,\n1460: )\n1461:\n1462: if precision not in units:\n1463: msg = 'The precision must be {} or \"{}\".'.format(\n1464: \", \".join([f'\"{each}\"' for each in units[:-1]]), units[-1]\n1465: )\n1466: raise ValueError(msg)\n1467:\n1468: self.precision = precision\n1469: super().__init__(**kwargs)\n1470:\n1471: def _serialize(self, value, attr, obj, **kwargs):\n1472: if value is None:\n1473: return None\n1474: base_unit = dt.timedelta(**{self.precision: 1})\n1475: return int(round(value.total_seconds() / base_unit.total_seconds())) # round to nearest int\n1476:\n1477: def _deserialize(self, value, attr, data, **kwargs):\n1478: try:\n1479: value = int(value)\n1480: except (TypeError, ValueError) as error:\n1481: raise self.make_error(\"invalid\") from error\n1482:\n1483: kwargs = {self.precision: value}\n1484:\n1485: try:\n1486: return dt.timedelta(**kwargs)\n1487: except OverflowError as error:\n1488: raise self.make_error(\"invalid\") from error\n1489:\n1490:\n1491:class Mapping(Field):\n1492: \"\"\"An abstract class for objects with key-value pairs.\n1493:\n1494: :param keys: A field class or instance for dict keys.\n1495: :param values: A field class or instance for dict values.\n1496: :param kwargs: The same keyword arguments that :class:`Field` receives.\n1497:\n1498: .. note::\n1499: When the structure of nested data is not known, you may omit the\n1500: `keys` and `values` arguments to prevent content validation.\n1501:\n1502: .. versionadded:: 3.0.0rc4\n1503: \"\"\"\n1504:\n1505: mapping_type = dict\n1506:\n1507: #: Default error messages.\n1508: default_error_messages = {\"invalid\": \"Not a valid mapping type.\"}\n1509:\n1510: def __init__(\n1511: self,\n1512: keys: typing.Optional[typing.Union[Field, type]] = None,\n1513: values: typing.Optional[typing.Union[Field, type]] = None,\n1514: **kwargs,\n1515: ):\n1516: super().__init__(**kwargs)\n1517: if keys is None:\n1518: self.key_field = None\n1519: else:\n1520: try:\n1521: self.key_field = resolve_field_instance(keys)\n1522: except FieldInstanceResolutionError as error:\n1523: raise ValueError(\n1524: '\"keys\" must be a subclass or instance of '\n(473 more lines below)\nFile updated. Please review the changes and make sure they are correct (correct indentation, no duplicate lines, etc). Edit the file again if necessary.\n",
"response": "My edit command did not use the proper indentation, I will fix my syntax in this follow up edit command.\n```\nedit 1475:1475\n return int(round(value.total_seconds() / base_unit.total_seconds())) # round to nearest int\nend_of_edit\n```",
"state": "{\"open_file\": \"/marshmallow-code__marshmallow/src/marshmallow/fields.py\", \"working_dir\": \"/marshmallow-code__marshmallow\"}\n",
"thought": "My edit command did not use the proper indentation, I will fix my syntax in this follow up edit command.\n"
},
{
"action": "python reproduce.py\n",
"observation": "345\n",
"response": "The code has been updated to use the `round` function, which should fix the rounding issue. Before submitting the changes, it would be prudent to run the reproduce.py code again to ensure that this change has the desired effect. I see that \"Current directory\" is still `/marshmallow-code__marshmallow`, so we can just run `reproduce.py` directly.\n```\npython reproduce.py\n```",
"state": "{\"open_file\": \"/marshmallow-code__marshmallow/src/marshmallow/fields.py\", \"working_dir\": \"/marshmallow-code__marshmallow\"}\n",
"thought": "The code has been updated to use the `round` function, which should fix the rounding issue. Before submitting the changes, it would be prudent to run the reproduce.py code again to ensure that this change has the desired effect. I see that \"Current directory\" is still `/marshmallow-code__marshmallow`, so we can just run `reproduce.py` directly.\n"
},
{
"action": "rm reproduce.py\n",
"observation": "",
"response": "The output has changed from 344 to 345, which suggests that the rounding issue has been fixed. Let's remove the reproduce.py file since it is no longer needed.\n```\nrm reproduce.py\n```",
"state": "{\"open_file\": \"/marshmallow-code__marshmallow/src/marshmallow/fields.py\", \"working_dir\": \"/marshmallow-code__marshmallow\"}\n",
"thought": "The output has changed from 344 to 345, which suggests that the rounding issue has been fixed. Let's remove the reproduce.py file since it is no longer needed.\n"
},
{
"action": "submit\n",
"observation": "\ndiff --git a/src/marshmallow/fields.py b/src/marshmallow/fields.py\nindex ad388c7..20da768 100644\n--- a/src/marshmallow/fields.py\n+++ b/src/marshmallow/fields.py\n@@ -1472,7 +1472,7 @@ class TimeDelta(Field):\n if value is None:\n return None\n base_unit = dt.timedelta(**{self.precision: 1})\n- return int(value.total_seconds() / base_unit.total_seconds())\n+ return int(round(value.total_seconds() / base_unit.total_seconds())) # round to nearest int\n \n def _deserialize(self, value, attr, data, **kwargs):\n try:\n",
"response": "rm doesn't have any output when it deletes successfully, so that must have worked. Now that we have fixed the issue, we should submit our changes to the code base. Let's submit the changes using the `submit` command.\n```\nsubmit\n```",
"state": "{\"open_file\": \"/marshmallow-code__marshmallow/src/marshmallow/fields.py\", \"working_dir\": \"/marshmallow-code__marshmallow\"}\n",
"thought": "rm doesn't have any output when it deletes successfully, so that must have worked. Now that we have fixed the issue, we should submit our changes to the code base. Let's submit the changes using the `submit` command.\n"
}
],
"history": [
{
"role": "system",
"content": "SETTING: You are an autonomous programmer, and you're working directly in the command line with a special interface.\n\nThe special interface consists of a file editor that shows you 100 lines of a file at a time.\nIn addition to typical bash commands, you can also use the following commands to help you navigate and edit files.\n\nCOMMANDS:\nopen:\n docstring: opens the file at the given path in the editor. If line_number is provided, the window will be move to include that line\n signature: open <path> [<line_number>]\n arguments:\n - path (string) [required]: the path to the file to open\n - line_number (integer) [optional]: the line number to move the window to (if not provided, the window will start at the top of the file)\n\ngoto:\n docstring: moves the window to show <line_number>\n signature: goto <line_number>\n arguments:\n - line_number (integer) [required]: the line number to move the window to\n\nscroll_down:\n docstring: moves the window down {WINDOW} lines\n signature: scroll_down\n\nscroll_up:\n docstring: moves the window down {WINDOW} lines\n signature: scroll_down\n\ncreate:\n docstring: creates and opens a new file with the given name\n signature: create <filename>\n arguments:\n - filename (string) [required]: the name of the file to create\n\nsubmit:\n docstring: submits your current code and terminates the session\n signature: submit\n\nsearch_dir:\n docstring: searches for search_term in all files in dir. If dir is not provided, searches in the current directory\n signature: search_dir <search_term> [<dir>]\n arguments:\n - search_term (string) [required]: the term to search for\n - dir (string) [optional]: the directory to search in (if not provided, searches in the current directory)\n\nsearch_file:\n docstring: searches for search_term in file. If file is not provided, searches in the current open file\n signature: search_file <search_term> [<file>]\n arguments:\n - search_term (string) [required]: the term to search for\n - file (string) [optional]: the file to search in (if not provided, searches in the current open file)\n\nfind_file:\n docstring: finds all files with the given name in dir. If dir is not provided, searches in the current directory\n signature: find_file <file_name> [<dir>]\n arguments:\n - file_name (string) [required]: the name of the file to search for\n - dir (string) [optional]: the directory to search in (if not provided, searches in the current directory)\n\nedit:\n docstring: replaces lines <start_line> through <end_line> (inclusive) with the given text in the open file. The replacement text is terminated by a line with only end_of_edit on it. All of the <replacement text> will be entered, so make sure your indentation is formatted properly. Python files will be checked for syntax errors after the edit. If the system detects a syntax error, the edit will not be executed. Simply try to edit the file again, but make sure to read the error message and modify the edit command you issue accordingly. Issuing the same command a second time will just lead to the same error message again.\n signature: edit <start_line>:<end_line>\n<replacement_text>\nend_of_edit\n arguments:\n - start_line (integer) [required]: the line number to start the edit at\n - end_line (integer) [required]: the line number to end the edit at (inclusive)\n - replacement_text (string) [required]: the text to replace the current selection with\n\n\n\nPlease note that THE EDIT COMMAND REQUIRES PROPER INDENTATION. \nIf you'd like to add the line ' print(x)' you must fully write that out, with all those spaces before the code! Indentation is important and code that is not indented correctly will fail and require fixing before it can be run.\n\nRESPONSE FORMAT:\nYour shell prompt is formatted as follows:\n(Open file: <path>) <cwd> $\n\nYou need to format your output using two fields; discussion and command.\nYour output should always include _one_ discussion and _one_ command field EXACTLY as in the following example:\nDISCUSSION\nFirst I'll start by using ls to see what files are in the current directory. Then maybe we can look at some relevant files to see what they look like.\n```\nls -a\n```\n\nYou should only include a *SINGLE* command in the command section and then wait for a response from the shell before continuing with more discussion and commands. Everything you include in the DISCUSSION section will be saved for future reference.\nIf you'd like to issue two commands at once, PLEASE DO NOT DO THAT! Please instead first submit just the first command, and then after receiving a response you'll be able to issue the second command. \nYou're free to use any other bash commands you want (e.g. find, grep, cat, ls, cd) in addition to the special commands listed above.\nHowever, the environment does NOT support interactive session commands (e.g. python, vim), so please do not invoke them.",
"agent": "primary"
},
{
"role": "user",
"content": "We're currently solving the following issue within our repository. Here's the issue text:\nISSUE:\nTimeDelta serialization precision\nHi there!\n\nI just found quite strange behaviour of `TimeDelta` field serialization\n\n```python3\nfrom marshmallow.fields import TimeDelta\nfrom datetime import timedelta\n\ntd_field = TimeDelta(precision=\"milliseconds\")\n\nobj = dict()\nobj[\"td_field\"] = timedelta(milliseconds=345)\n\nprint(td_field.serialize(\"td_field\", obj))\n```\n\nOutput of this snippet is `344`, but it seems that `345` is correct.\n\nLooks like a rounding issue here: https://github.com/marshmallow-code/marshmallow/blob/dev/src/marshmallow/fields.py#L1474\n\n\nINSTRUCTIONS:\nNow, you're going to solve this issue on your own. Your terminal session has started and you're in the repository's root directory. You can use any bash commands or the special interface to help you. Edit all the files you need to and run any checks or tests that you want. \nRemember, YOU CAN ONLY ENTER ONE COMMAND AT A TIME. You should always wait for feedback after every command. \nWhen you're satisfied with all of the changes you've made, you can submit your changes to the code base by simply running the submit command.\nNote however that you cannot use any interactive session commands (e.g. python, vim) in this environment, but you can write scripts and run them. E.g. you can write a python script and then run it with `python <script_name>.py`.\n\nNOTE ABOUT THE EDIT COMMAND: Indentation really matters! When editing a file, make sure to insert appropriate indentation before each line! \n\nIMPORTANT TIPS:\n1. Always start by trying to replicate the bug that the issues discusses. \n If the issue includes code for reproducing the bug, we recommend that you re-implement that in your environment, and run it to make sure you can reproduce the bug.\n Then start trying to fix it.\n When you think you've fixed the bug, re-run the bug reproduction script to make sure that the bug has indeed been fixed.\n \n If the bug reproduction script does not print anything when it succesfully runs, we recommend adding a print(\"Script completed successfully, no errors.\") command at the end of the file,\n so that you can be sure that the script indeed ran fine all the way through. \n\n2. If you run a command and it doesn't work, try running a different command. A command that did not work once will not work the second time unless you modify it!\n\n3. If you open a file and need to get to an area around a specific line that is not in the first 100 lines, say line 583, don't just use the scroll_down command multiple times. Instead, use the goto 583 command. It's much quicker. \n \n4. If the bug reproduction script requires inputting/reading a specific file, such as buggy-input.png, and you'd like to understand how to input that file, conduct a search in the existing repo code, to see whether someone else has already done that. Do this by running the command: find_file \"buggy-input.png\" If that doensn't work, use the linux 'find' command. \n\n5. Always make sure to look at the currently open file and the current working directory (which appears right after the currently open file). The currently open file might be in a different directory than the working directory! Note that some commands, such as 'create', open files, so they might change the current open file.\n\n6. When editing files, it is easy to accidentally specify a wrong line number or to write code with incorrect indentation. Always check the code after you issue an edit to make sure that it reflects what you wanted to accomplish. If it didn't, issue another command to fix it.\n \n\n(Open file: n/a)\n(Current directory: /marshmallow-code__marshmallow)\nbash-$",
"agent": "primary"
},
{
"role": "assistant",
"content": "Let's list out some of the files in the repository to get an idea of the structure and contents. We can use the `ls -F` command to list the files in the current directory.\n```\nls -F\n```",
"thought": "Let's list out some of the files in the repository to get an idea of the structure and contents. We can use the `ls -F` command to list the files in the current directory.\n",
"action": "ls -F\n",
"agent": "primary"
},
{
"role": "user",
"content": "AUTHORS.rst\nCHANGELOG.rst\nCODE_OF_CONDUCT.md\nCONTRIBUTING.rst\nLICENSE\nMANIFEST.in\nNOTICE\nREADME.rst\nRELEASING.md\nazure-pipelines.yml\ndocs/\nexamples/\nperformance/\npyproject.toml\nsetup.cfg\nsetup.py\nsrc/\ntests/\ntox.ini\n\n(Open file: n/a)\n(Current directory: /marshmallow-code__marshmallow)\nbash-$",
"agent": "primary"
},
{
"role": "assistant",
"content": "We see that there's a setup.py file. This could be useful for installing the package locally. Since we'll probably need to reproduce the issue to solve it, it would be a good idea to install the package locally. Let's checkout the setup.py file to see what commands we can use to install the package.\n```\nopen setup.py\n```",
"thought": "We see that there's a setup.py file. This could be useful for installing the package locally. Since we'll probably need to reproduce the issue to solve it, it would be a good idea to install the package locally. Let's checkout the setup.py file to see what commands we can use to install the package.\n",
"action": "open setup.py\n",
"agent": "primary"
},
{
"role": "user",
"content": "[File: /marshmallow-code__marshmallow/setup.py (94 lines total)]\n1:import re\n2:from setuptools import setup, find_packages\n3:\n4:EXTRAS_REQUIRE = {\n5: \"tests\": [\"pytest\", \"pytz\", \"simplejson\"],\n6: \"lint\": [\n7: \"mypy==0.910\",\n8: \"flake8==4.0.1\",\n9: \"flake8-bugbear==21.9.2\",\n10: \"pre-commit~=2.4\",\n11: ],\n12: \"docs\": [\n13: \"sphinx==4.2.0\",\n14: \"sphinx-issues==1.2.0\",\n15: \"alabaster==0.7.12\",\n16: \"sphinx-version-warning==1.1.2\",\n17: \"autodocsumm==0.2.7\",\n18: ],\n19:}\n20:EXTRAS_REQUIRE[\"dev\"] = EXTRAS_REQUIRE[\"tests\"] + EXTRAS_REQUIRE[\"lint\"] + [\"tox\"]\n21:\n22:\n23:def find_version(fname):\n24: \"\"\"Attempts to find the version number in the file names fname.\n25: Raises RuntimeError if not found.\n26: \"\"\"\n27: version = \"\"\n28: with open(fname) as fp:\n29: reg = re.compile(r'__version__ = [\\'\"]([^\\'\"]*)[\\'\"]')\n30: for line in fp:\n31: m = reg.match(line)\n32: if m:\n33: version = m.group(1)\n34: break\n35: if not version:\n36: raise RuntimeError(\"Cannot find version information\")\n37: return version\n38:\n39:\n40:def read(fname):\n41: with open(fname) as fp:\n42: content = fp.read()\n43: return content\n44:\n45:\n46:setup(\n47: name=\"marshmallow\",\n48: version=find_version(\"src/marshmallow/__init__.py\"),\n49: description=(\n50: \"A lightweight library for converting complex \"\n51: \"datatypes to and from native Python datatypes.\"\n52: ),\n53: long_description=read(\"README.rst\"),\n54: author=\"Steven Loria\",\n55: author_email=\"sloria1@gmail.com\",\n56: url=\"https://github.com/marshmallow-code/marshmallow\",\n57: packages=find_packages(\"src\", exclude=(\"test*\", \"examples\")),\n58: package_dir={\"\": \"src\"},\n59: package_data={\"marshmallow\": [\"py.typed\"]},\n60: include_package_data=True,\n61: extras_require=EXTRAS_REQUIRE,\n62: license=\"MIT\",\n63: zip_safe=False,\n64: keywords=[\n65: \"serialization\",\n66: \"rest\",\n67: \"json\",\n68: \"api\",\n69: \"marshal\",\n70: \"marshalling\",\n71: \"deserialization\",\n72: \"validation\",\n73: \"schema\",\n74: ],\n75: python_requires=\">=3.6\",\n76: classifiers=[\n77: \"Development Status :: 5 - Production/Stable\",\n78: \"Intended Audience :: Developers\",\n79: \"License :: OSI Approved :: MIT License\",\n80: \"Programming Language :: Python :: 3\",\n81: \"Programming Language :: Python :: 3.6\",\n82: \"Programming Language :: Python :: 3.7\",\n83: \"Programming Language :: Python :: 3.8\",\n84: \"Programming Language :: Python :: 3.9\",\n85: \"Programming Language :: Python :: 3.10\",\n86: ],\n87: test_suite=\"tests\",\n88: project_urls={\n89: \"Changelog\": \"https://marshmallow.readthedocs.io/en/latest/changelog.html\",\n90: \"Issues\": \"https://github.com/marshmallow-code/marshmallow/issues\",\n91: \"Funding\": \"https://opencollective.com/marshmallow\",\n92: \"Tidelift\": \"https://tidelift.com/subscription/pkg/pypi-marshmallow?utm_source=pypi-marshmallow&utm_medium=pypi\", # noqa\n93: },\n94:)\n\n(Open file: /marshmallow-code__marshmallow/setup.py)\n(Current directory: /marshmallow-code__marshmallow)\nbash-$",
"agent": "primary"
},
{
"role": "assistant",
"content": "The setup.py file contains a lot of useful information to install the package locally. In particular, I see there's a [dev] extras that installs all the dependencies needed for development. We can use this to install the package with all the necessary dependencies. Let's install the package locally with the [dev] extras.\n```\npip install -e .[dev]\n```",
"thought": "The setup.py file contains a lot of useful information to install the package locally. In particular, I see there's a [dev] extras that installs all the dependencies needed for development. We can use this to install the package with all the necessary dependencies. Let's install the package locally with the [dev] extras.\n",
"action": "pip install -e .[dev]\n",
"agent": "primary"
},
{
"role": "user",
"content": "Obtaining file:///marshmallow-code__marshmallow\n Installing build dependencies: started\n Installing build dependencies: finished with status 'done'\n Checking if build backend supports build_editable: started\n Checking if build backend supports build_editable: finished with status 'done'\n Getting requirements to build editable: started\n Getting requirements to build editable: finished with status 'done'\n Preparing editable metadata (pyproject.toml): started\n Preparing editable metadata (pyproject.toml): finished with status 'done'\nRequirement already satisfied: pytest in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (8.1.1)\nRequirement already satisfied: pytz in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (2024.1)\nRequirement already satisfied: simplejson in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (3.19.2)\nRequirement already satisfied: mypy==0.910 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (0.910)\nRequirement already satisfied: flake8==4.0.1 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (4.0.1)\nRequirement already satisfied: flake8-bugbear==21.9.2 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (21.9.2)\nRequirement already satisfied: pre-commit~=2.4 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (2.21.0)\nRequirement already satisfied: tox in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (4.14.2)\nRequirement already satisfied: mccabe<0.7.0,>=0.6.0 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from flake8==4.0.1) (0.6.1)\nRequirement already satisfied: pycodestyle<2.9.0,>=2.8.0 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from flake8==4.0.1) (2.8.0)\nRequirement already satisfied: pyflakes<2.5.0,>=2.4.0 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from flake8==4.0.1) (2.4.0)\nRequirement already satisfied: attrs>=19.2.0 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from flake8-bugbear==21.9.2) (23.2.0)\nRequirement already satisfied: typing-extensions>=3.7.4 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from mypy==0.910) (4.10.0)\nRequirement already satisfied: mypy-extensions<0.5.0,>=0.4.3 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from mypy==0.910) (0.4.4)\nRequirement already satisfied: toml in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from mypy==0.910) (0.10.2)\nRequirement already satisfied: cfgv>=2.0.0 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from pre-commit~=2.4) (3.4.0)\nRequirement already satisfied: identify>=1.0.0 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from pre-commit~=2.4) (2.5.35)\nRequirement already satisfied: nodeenv>=0.11.1 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from pre-commit~=2.4) (1.8.0)\nRequirement already satisfied: pyyaml>=5.1 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from pre-commit~=2.4) (6.0.1)\nRequirement already satisfied: virtualenv>=20.10.0 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from pre-commit~=2.4) (20.25.1)\nRequirement already satisfied: iniconfig in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from pytest) (2.0.0)\nRequirement already satisfied: packaging in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from pytest) (24.0)\nRequirement already satisfied: pluggy<2.0,>=1.4 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from pytest) (1.4.0)\nRequirement already satisfied: exceptiongroup>=1.0.0rc8 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from pytest) (1.2.0)\nRequirement already satisfied: tomli>=1 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from pytest) (2.0.1)\nRequirement already satisfied: cachetools>=5.3.2 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from tox) (5.3.3)\nRequirement already satisfied: chardet>=5.2 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from tox) (5.2.0)\nRequirement already satisfied: colorama>=0.4.6 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from tox) (0.4.6)\nRequirement already satisfied: filelock>=3.13.1 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from tox) (3.13.3)\nRequirement already satisfied: platformdirs>=4.1 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from tox) (4.2.0)\nRequirement already satisfied: pyproject-api>=1.6.1 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from tox) (1.6.1)\nRequirement already satisfied: setuptools in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from nodeenv>=0.11.1->pre-commit~=2.4) (68.2.2)\nRequirement already satisfied: distlib<1,>=0.3.7 in /root/miniconda3/envs/marshmallow-code__marshmallow__3.13/lib/python3.9/site-packages (from virtualenv>=20.10.0->pre-commit~=2.4) (0.3.8)\nChecking if build backend supports build_editable: started\nChecking if build backend supports build_editable: finished with status 'done'\nBuilding wheels for collected packages: marshmallow\n Building editable for marshmallow (pyproject.toml): started\n Building editable for marshmallow (pyproject.toml): finished with status 'done'\n Created wheel for marshmallow: filename=marshmallow-3.13.0-0.editable-py3-none-any.whl size=4534 sha256=fcca61a41cd2783d4a5b8471ebc48cf886d36f6c66a29cc9b02761fc174a024d\n Stored in directory: /tmp/pip-ephem-wheel-cache-h335xxo8/wheels/4d/da/d4/e230bf0a3f16cad5a83d235ac24a34b55178ddda181cb64dae\nSuccessfully built marshmallow\nInstalling collected packages: marshmallow\n Attempting uninstall: marshmallow\n Found existing installation: marshmallow 3.13.0\n Uninstalling marshmallow-3.13.0:\n Successfully uninstalled marshmallow-3.13.0\nSuccessfully installed marshmallow-3.13.0\nWARNING: Running pip as the 'root' user can result in broken permissions and conflicting behaviour with the system package manager. It is recommended to use a virtual environment instead: https://pip.pypa.io/warnings/venv\n\n(Open file: /marshmallow-code__marshmallow/setup.py)\n(Current directory: /marshmallow-code__marshmallow)\nbash-$",
"agent": "primary"
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"content": "Looks like it installed successfully. Now that we have the package installed, we can start working on the issue.\nLet's first start by reproducing the results of the issue. The issue includes some example code for reproduction, which we can use. We'll create a new file called `reproduce.py` and paste the example code into it.\n```\ncreate reproduce.py\n```",
"thought": "Looks like it installed successfully. Now that we have the package installed, we can start working on the issue.\nLet's first start by reproducing the results of the issue. The issue includes some example code for reproduction, which we can use. We'll create a new file called `reproduce.py` and paste the example code into it.\n",
"action": "create reproduce.py\n",
"agent": "primary"
},
{
"role": "user",
"content": "[File: /marshmallow-code__marshmallow/reproduce.py (1 lines total)]\n1:\n\n(Open file: /marshmallow-code__marshmallow/reproduce.py)\n(Current directory: /marshmallow-code__marshmallow)\nbash-$",
"agent": "primary"
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"role": "assistant",
"content": "Now let's paste in the example code from the issue.\n```\nedit 1:1\nfrom marshmallow.fields import TimeDelta\nfrom datetime import timedelta\n\ntd_field = TimeDelta(precision=\"milliseconds\")\n\nobj = dict()\nobj[\"td_field\"] = timedelta(milliseconds=345)\n\nprint(td_field.serialize(\"td_field\", obj))\nend_of_edit\n```",
"thought": "Now let's paste in the example code from the issue.\n",
"action": "edit 1:1\nfrom marshmallow.fields import TimeDelta\nfrom datetime import timedelta\n\ntd_field = TimeDelta(precision=\"milliseconds\")\n\nobj = dict()\nobj[\"td_field\"] = timedelta(milliseconds=345)\n\nprint(td_field.serialize(\"td_field\", obj))\nend_of_edit\n",
"agent": "primary"
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"role": "user",
"content": "[File: /marshmallow-code__marshmallow/reproduce.py (9 lines total)]\n1:from marshmallow.fields import TimeDelta\n2:from datetime import timedelta\n3:\n4:td_field = TimeDelta(precision=\"milliseconds\")\n5:\n6:obj = dict()\n7:obj[\"td_field\"] = timedelta(milliseconds=345)\n8:\n9:print(td_field.serialize(\"td_field\", obj))\nFile updated. Please review the changes and make sure they are correct (correct indentation, no duplicate lines, etc). Edit the file again if necessary.\n\n(Open file: /marshmallow-code__marshmallow/reproduce.py)\n(Current directory: /marshmallow-code__marshmallow)\nbash-$",
"agent": "primary"
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{
"role": "assistant",
"content": "Now let's run the code to see if we see the same output as the issue.\n```\npython reproduce.py\n```",
"thought": "Now let's run the code to see if we see the same output as the issue.\n",
"action": "python reproduce.py\n",
"agent": "primary"
},
{
"role": "user",
"content": "344\n\n(Open file: /marshmallow-code__marshmallow/reproduce.py)\n(Current directory: /marshmallow-code__marshmallow)\nbash-$",
"agent": "primary"
},
{
"role": "assistant",
"content": "We are indeed seeing the same output as the issue. The issue suggests that we should look at line 1474 of the `fields.py` file to see if there is a rounding issue. Let's open the `fields.py` file and navigate to line 1474 to see the relevant code. First we should find the `fields.py` file in the repository. It is likely to be in the `src/marshmallow` directory, but we should check to be sure.\n```\nls -F\n```",
"thought": "We are indeed seeing the same output as the issue. The issue suggests that we should look at line 1474 of the `fields.py` file to see if there is a rounding issue. Let's open the `fields.py` file and navigate to line 1474 to see the relevant code. First we should find the `fields.py` file in the repository. It is likely to be in the `src/marshmallow` directory, but we should check to be sure.\n",
"action": "ls -F\n",
"agent": "primary"
},
{
"role": "user",
"content": "AUTHORS.rst\nCHANGELOG.rst\nCODE_OF_CONDUCT.md\nCONTRIBUTING.rst\nLICENSE\nMANIFEST.in\nNOTICE\nREADME.rst\nRELEASING.md\nazure-pipelines.yml\ndocs/\nexamples/\nperformance/\npyproject.toml\nreproduce.py\nsetup.cfg\nsetup.py\nsrc/\ntests/\ntox.ini\n\n(Open file: /marshmallow-code__marshmallow/reproduce.py)\n(Current directory: /marshmallow-code__marshmallow)\nbash-$",
"agent": "primary"
},
{
"role": "assistant",
"content": "It looks like the `src` directory is present, which suggests that the `fields.py` file is likely to be in the `src` directory. Let's use find_file to see where it is.\n```\nfind_file \"fields.py\" src\n```",
"thought": "It looks like the `src` directory is present, which suggests that the `fields.py` file is likely to be in the `src` directory. Let's use find_file to see where it is.\n",
"action": "find_file \"fields.py\" src\n",
"agent": "primary"
},
{
"role": "user",
"content": "Found 1 matches for \"fields.py\" in /marshmallow-code__marshmallow/src:\n/marshmallow-code__marshmallow/src/marshmallow/fields.py\n\n(Open file: /marshmallow-code__marshmallow/reproduce.py)\n(Current directory: /marshmallow-code__marshmallow)\nbash-$",
"agent": "primary"
},
{
"role": "assistant",
"content": "It looks like the `fields.py` file is present in the `./src/marshmallow/` directory. The issue also points to a specific URL with line number 1474. We should navigate to that line in fields.py to see the relevant code for the `TimeDelta` serialization.\n```\nopen src/marshmallow/fields.py 1474\n```",
"thought": "It looks like the `fields.py` file is present in the `./src/marshmallow/` directory. The issue also points to a specific URL with line number 1474. We should navigate to that line in fields.py to see the relevant code for the `TimeDelta` serialization.\n",
"action": "open src/marshmallow/fields.py 1474\n",
"agent": "primary"
},
{
"role": "user",
"content": "[File: /marshmallow-code__marshmallow/src/marshmallow/fields.py (1997 lines total)]\n(1458 more lines above)\n1459: self.WEEKS,\n1460: )\n1461:\n1462: if precision not in units:\n1463: msg = 'The precision must be {} or \"{}\".'.format(\n1464: \", \".join([f'\"{each}\"' for each in units[:-1]]), units[-1]\n1465: )\n1466: raise ValueError(msg)\n1467:\n1468: self.precision = precision\n1469: super().__init__(**kwargs)\n1470:\n1471: def _serialize(self, value, attr, obj, **kwargs):\n1472: if value is None:\n1473: return None\n1474: base_unit = dt.timedelta(**{self.precision: 1})\n1475: return int(value.total_seconds() / base_unit.total_seconds())\n1476:\n1477: def _deserialize(self, value, attr, data, **kwargs):\n1478: try:\n1479: value = int(value)\n1480: except (TypeError, ValueError) as error:\n1481: raise self.make_error(\"invalid\") from error\n1482:\n1483: kwargs = {self.precision: value}\n1484:\n1485: try:\n1486: return dt.timedelta(**kwargs)\n1487: except OverflowError as error:\n1488: raise self.make_error(\"invalid\") from error\n1489:\n1490:\n1491:class Mapping(Field):\n1492: \"\"\"An abstract class for objects with key-value pairs.\n1493:\n1494: :param keys: A field class or instance for dict keys.\n1495: :param values: A field class or instance for dict values.\n1496: :param kwargs: The same keyword arguments that :class:`Field` receives.\n1497:\n1498: .. note::\n1499: When the structure of nested data is not known, you may omit the\n1500: `keys` and `values` arguments to prevent content validation.\n1501:\n1502: .. versionadded:: 3.0.0rc4\n1503: \"\"\"\n1504:\n1505: mapping_type = dict\n1506:\n1507: #: Default error messages.\n1508: default_error_messages = {\"invalid\": \"Not a valid mapping type.\"}\n1509:\n1510: def __init__(\n1511: self,\n1512: keys: typing.Optional[typing.Union[Field, type]] = None,\n1513: values: typing.Optional[typing.Union[Field, type]] = None,\n1514: **kwargs,\n1515: ):\n1516: super().__init__(**kwargs)\n1517: if keys is None:\n1518: self.key_field = None\n1519: else:\n1520: try:\n1521: self.key_field = resolve_field_instance(keys)\n1522: except FieldInstanceResolutionError as error:\n1523: raise ValueError(\n1524: '\"keys\" must be a subclass or instance of '\n1525: \"marshmallow.base.FieldABC.\"\n1526: ) from error\n1527:\n1528: if values is None:\n1529: self.value_field = None\n1530: else:\n1531: try:\n1532: self.value_field = resolve_field_instance(values)\n1533: except FieldInstanceResolutionError as error:\n1534: raise ValueError(\n1535: '\"values\" must be a subclass or instance of '\n1536: \"marshmallow.base.FieldABC.\"\n1537: ) from error\n1538: if isinstance(self.value_field, Nested):\n1539: self.only = self.value_field.only\n1540: self.exclude = self.value_field.exclude\n1541:\n1542: def _bind_to_schema(self, field_name, schema):\n1543: super()._bind_to_schema(field_name, schema)\n1544: if self.value_field:\n1545: self.value_field = copy.deepcopy(self.value_field)\n1546: self.value_field._bind_to_schema(field_name, self)\n1547: if isinstance(self.value_field, Nested):\n1548: self.value_field.only = self.only\n1549: self.value_field.exclude = self.exclude\n1550: if self.key_field:\n1551: self.key_field = copy.deepcopy(self.key_field)\n1552: self.key_field._bind_to_schema(field_name, self)\n1553:\n1554: def _serialize(self, value, attr, obj, **kwargs):\n1555: if value is None:\n1556: return None\n1557: if not self.value_field and not self.key_field:\n1558: return self.mapping_type(value)\n(439 more lines below)\n\n(Open file: /marshmallow-code__marshmallow/src/marshmallow/fields.py)\n(Current directory: /marshmallow-code__marshmallow)\nbash-$",
"agent": "primary"
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"role": "assistant",
"content": "We are now looking at the relevant section of the `fields.py` file where the `TimeDelta` serialization occurs. The issue suggests that there is a rounding problem near line 1474. The current implementation uses integer division, which truncates the decimal part and can lead to incorrect rounding on line 1475.To fix this issue, we should ensure that the division results in a float, and then round the result to the nearest integer before converting it to an int. This should preserve the milliseconds precision as expected. Let's make the necessary edit to the code.\n```\nedit 1475:1475\nreturn int(round(value.total_seconds() / base_unit.total_seconds())) # round to nearest int\nend_of_edit\n```",
"thought": "We are now looking at the relevant section of the `fields.py` file where the `TimeDelta` serialization occurs. The issue suggests that there is a rounding problem near line 1474. The current implementation uses integer division, which truncates the decimal part and can lead to incorrect rounding on line 1475.To fix this issue, we should ensure that the division results in a float, and then round the result to the nearest integer before converting it to an int. This should preserve the milliseconds precision as expected. Let's make the necessary edit to the code.\n",
"action": "edit 1475:1475\nreturn int(round(value.total_seconds() / base_unit.total_seconds())) # round to nearest int\nend_of_edit\n",
"agent": "primary"
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"role": "user",
"content": "Your proposed edit has introduced new syntax error(s). Please understand the fixes and retry your edit commmand.\n\nERRORS:\n- E999 IndentationError: unexpected indent\n\nThis is how your edit would have looked if applied\n-------------------------------------------------\n[File: /marshmallow-code__marshmallow/src/marshmallow/fields.py (1997 lines total)]\n(1468 more lines above)\n1469: super().__init__(**kwargs)\n1470:\n1471: def _serialize(self, value, attr, obj, **kwargs):\n1472: if value is None:\n1473: return None\n1474: base_unit = dt.timedelta(**{self.precision: 1})\n1475:return int(round(value.total_seconds() / base_unit.total_seconds())) # round to nearest int\n1476:\n1477: def _deserialize(self, value, attr, data, **kwargs):\n1478: try:\n1479: value = int(value)\n(518 more lines below)\n-------------------------------------------------\n\nThis is the original code before your edit\n-------------------------------------------------\n[File: /marshmallow-code__marshmallow/src/marshmallow/fields.py (1997 lines total)]\n(1469 more lines above)\n1470:\n1471: def _serialize(self, value, attr, obj, **kwargs):\n1472: if value is None:\n1473: return None\n1474: base_unit = dt.timedelta(**{self.precision: 1})\n1475: return int(value.total_seconds() / base_unit.total_seconds())\n1476:\n1477: def _deserialize(self, value, attr, data, **kwargs):\n1478: try:\n1479: value = int(value)\n1480: except (TypeError, ValueError) as error:\n(517 more lines below)\n-------------------------------------------------\nYour changes have NOT been applied. Please fix your edit command and try again.\nYou either need to 1) Specify the correct start/end line arguments or 2) Correct your edit code.\nDO NOT re-run the same failed edit command. Running it again will lead to the same error.\n\n(Open file: /marshmallow-code__marshmallow/src/marshmallow/fields.py)\n(Current directory: /marshmallow-code__marshmallow)\nbash-$",
"agent": "primary"
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"role": "assistant",
"content": "My edit command did not use the proper indentation, I will fix my syntax in this follow up edit command.\n```\nedit 1475:1475\n return int(round(value.total_seconds() / base_unit.total_seconds())) # round to nearest int\nend_of_edit\n```",
"thought": "My edit command did not use the proper indentation, I will fix my syntax in this follow up edit command.\n",
"action": "edit 1475:1475\n return int(round(value.total_seconds() / base_unit.total_seconds())) # round to nearest int\nend_of_edit\n",
"agent": "primary"
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{
"role": "user",
"content": "[File: /marshmallow-code__marshmallow/src/marshmallow/fields.py (1997 lines total)]\n(1424 more lines above)\n1425:\n1426: :param precision: Influences how the integer is interpreted during\n1427: (de)serialization. Must be 'days', 'seconds', 'microseconds',\n1428: 'milliseconds', 'minutes', 'hours' or 'weeks'.\n1429: :param kwargs: The same keyword arguments that :class:`Field` receives.\n1430:\n1431: .. versionchanged:: 2.0.0\n1432: Always serializes to an integer value to avoid rounding errors.\n1433: Add `precision` parameter.\n1434: \"\"\"\n1435:\n1436: DAYS = \"days\"\n1437: SECONDS = \"seconds\"\n1438: MICROSECONDS = \"microseconds\"\n1439: MILLISECONDS = \"milliseconds\"\n1440: MINUTES = \"minutes\"\n1441: HOURS = \"hours\"\n1442: WEEKS = \"weeks\"\n1443:\n1444: #: Default error messages.\n1445: default_error_messages = {\n1446: \"invalid\": \"Not a valid period of time.\",\n1447: \"format\": \"{input!r} cannot be formatted as a timedelta.\",\n1448: }\n1449:\n1450: def __init__(self, precision: str = SECONDS, **kwargs):\n1451: precision = precision.lower()\n1452: units = (\n1453: self.DAYS,\n1454: self.SECONDS,\n1455: self.MICROSECONDS,\n1456: self.MILLISECONDS,\n1457: self.MINUTES,\n1458: self.HOURS,\n1459: self.WEEKS,\n1460: )\n1461:\n1462: if precision not in units:\n1463: msg = 'The precision must be {} or \"{}\".'.format(\n1464: \", \".join([f'\"{each}\"' for each in units[:-1]]), units[-1]\n1465: )\n1466: raise ValueError(msg)\n1467:\n1468: self.precision = precision\n1469: super().__init__(**kwargs)\n1470:\n1471: def _serialize(self, value, attr, obj, **kwargs):\n1472: if value is None:\n1473: return None\n1474: base_unit = dt.timedelta(**{self.precision: 1})\n1475: return int(round(value.total_seconds() / base_unit.total_seconds())) # round to nearest int\n1476:\n1477: def _deserialize(self, value, attr, data, **kwargs):\n1478: try:\n1479: value = int(value)\n1480: except (TypeError, ValueError) as error:\n1481: raise self.make_error(\"invalid\") from error\n1482:\n1483: kwargs = {self.precision: value}\n1484:\n1485: try:\n1486: return dt.timedelta(**kwargs)\n1487: except OverflowError as error:\n1488: raise self.make_error(\"invalid\") from error\n1489:\n1490:\n1491:class Mapping(Field):\n1492: \"\"\"An abstract class for objects with key-value pairs.\n1493:\n1494: :param keys: A field class or instance for dict keys.\n1495: :param values: A field class or instance for dict values.\n1496: :param kwargs: The same keyword arguments that :class:`Field` receives.\n1497:\n1498: .. note::\n1499: When the structure of nested data is not known, you may omit the\n1500: `keys` and `values` arguments to prevent content validation.\n1501:\n1502: .. versionadded:: 3.0.0rc4\n1503: \"\"\"\n1504:\n1505: mapping_type = dict\n1506:\n1507: #: Default error messages.\n1508: default_error_messages = {\"invalid\": \"Not a valid mapping type.\"}\n1509:\n1510: def __init__(\n1511: self,\n1512: keys: typing.Optional[typing.Union[Field, type]] = None,\n1513: values: typing.Optional[typing.Union[Field, type]] = None,\n1514: **kwargs,\n1515: ):\n1516: super().__init__(**kwargs)\n1517: if keys is None:\n1518: self.key_field = None\n1519: else:\n1520: try:\n1521: self.key_field = resolve_field_instance(keys)\n1522: except FieldInstanceResolutionError as error:\n1523: raise ValueError(\n1524: '\"keys\" must be a subclass or instance of '\n(473 more lines below)\nFile updated. Please review the changes and make sure they are correct (correct indentation, no duplicate lines, etc). Edit the file again if necessary.\n\n(Open file: /marshmallow-code__marshmallow/src/marshmallow/fields.py)\n(Current directory: /marshmallow-code__marshmallow)\nbash-$",
"agent": "primary"
},
{
"role": "assistant",
"content": "The code has been updated to use the `round` function, which should fix the rounding issue. Before submitting the changes, it would be prudent to run the reproduce.py code again to ensure that this change has the desired effect. I see that \"Current directory\" is still `/marshmallow-code__marshmallow`, so we can just run `reproduce.py` directly.\n```\npython reproduce.py\n```",
"thought": "The code has been updated to use the `round` function, which should fix the rounding issue. Before submitting the changes, it would be prudent to run the reproduce.py code again to ensure that this change has the desired effect. I see that \"Current directory\" is still `/marshmallow-code__marshmallow`, so we can just run `reproduce.py` directly.\n",
"action": "python reproduce.py\n",
"agent": "primary"
},
{
"role": "user",
"content": "345\n\n(Open file: /marshmallow-code__marshmallow/src/marshmallow/fields.py)\n(Current directory: /marshmallow-code__marshmallow)\nbash-$",
"agent": "primary"
},
{
"role": "assistant",
"content": "The output has changed from 344 to 345, which suggests that the rounding issue has been fixed. Let's remove the reproduce.py file since it is no longer needed.\n```\nrm reproduce.py\n```",
"thought": "The output has changed from 344 to 345, which suggests that the rounding issue has been fixed. Let's remove the reproduce.py file since it is no longer needed.\n",
"action": "rm reproduce.py\n",
"agent": "primary"
},
{
"role": "user",
"content": "Your command ran successfully and did not produce any output.\n(Open file: /marshmallow-code__marshmallow/src/marshmallow/fields.py)\n(Current directory: /marshmallow-code__marshmallow)\nbash-$",
"agent": "primary"
},
{
"role": "assistant",
"content": "rm doesn't have any output when it deletes successfully, so that must have worked. Now that we have fixed the issue, we should submit our changes to the code base. Let's submit the changes using the `submit` command.\n```\nsubmit\n```",
"thought": "rm doesn't have any output when it deletes successfully, so that must have worked. Now that we have fixed the issue, we should submit our changes to the code base. Let's submit the changes using the `submit` command.\n",
"action": "submit\n",
"agent": "primary"
}
],
"info": {
"exit_status": "submitted",
"submission": "\ndiff --git a/src/marshmallow/fields.py b/src/marshmallow/fields.py\nindex ad388c7..20da768 100644\n--- a/src/marshmallow/fields.py\n+++ b/src/marshmallow/fields.py\n@@ -1472,7 +1472,7 @@ class TimeDelta(Field):\n if value is None:\n return None\n base_unit = dt.timedelta(**{self.precision: 1})\n- return int(value.total_seconds() / base_unit.total_seconds())\n+ return int(round(value.total_seconds() / base_unit.total_seconds())) # round to nearest int\n \n def _deserialize(self, value, attr, data, **kwargs):\n try:\n",
"model_stats": {
"total_cost": 0,
"instance_cost": 0,
"tokens_sent": 0,
"tokens_received": 0,
"api_calls": 0
}
}
}
At a high level, the experiments folder is organized in the following manner:
trajectories
├── <user 1> 👩💻
│ ├── <experiment 1> 🧪
│ │ ├── all_preds.jsonl
│ │ ├── args.yaml
│ │ ├── *.html (Webpage Files)
│ │ └── *.traj (Trajectories)
│ └── <experiment 2> 🧪
│ ├── all_preds.jsonl
│ ├── args.yaml
│ ├── *.html (Webpage Files)
│ └── *.traj (Trajectories)
├── <user 2> 👨💻
│ ├── <experiment 1> 🧪
│ │ └── ...
│ └── <experiment 2> 🧪
│ └── ...
...
trajectories/<user name>/<experiment name>. The <user name> is automatically inferred from your system, and the experiment name is inferred from the arguments of the run.py.
Viewing trajectories
We provide a trajectory viewer for an easy viewing of trajectories.
How an Experiment Folder is Generated
Each call to run.py produces a single trajectories/<user name>/<experiment name> folder containing the following assets:
all_preds.jsonl: A single file containing all of the predictions generated for the experiment (1 prediction per task instance), where each line is formatted as:{ "instance_id": "<Unique task instance ID>", "model_patch": "<.patch file content string>", "model_name_or_path": "<Model name here (Inferred from experiment configs)>", }args.yaml: A summary of the configurations for the experiment run.<instance_id>.traj: A.jsonformatted file containing the (thought, action, observation) turns generated by SWE-agent towards solving<instance_id>.<instance_id>.html: An.htmlsingle webpage render of the trajectory, which can be directly opened in the browser for easier viewing of the trajectory.
Tip
- Evaluation is not completed by
run.py, it is a separate step (see benchmarking) all_preds.jsonlcan be referenced directly into SWE-bench to run evaluation (see benchmarking)- Trajectories can be turned into custom demonstrations for SWE-agent (more information).
-
Something broken? Report bug
-
Something unclear? Ask question